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gatC gatC gatB gatB gatA gatA Xaut_3243 Xaut_3243 Xaut_4065 Xaut_4065 Xaut_0375 Xaut_0375 Xaut_4656 Xaut_4656 aspS aspS Xaut_1323 Xaut_1323 Xaut_1052 Xaut_1052 Xaut_4705 Xaut_4705
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
gatCglutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (95 aa)    
Predicted Functional Partners:
gatB
glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
 0.999
gatA
glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
 
 0.998
Xaut_3243
PFAM: Amidase; KEGG: rfr:Rfer_0989 amidase; Belongs to the amidase family.
 
 0.994
Xaut_4065
PFAM: Amidase; KEGG: har:HEAR2676 putative amidase.
 
 0.989
Xaut_0375
PFAM: Amidase; KEGG: rpd:RPD_1881 amidase.
 
 0.988
Xaut_4656
TIGRFAM: Amidohydrolase AtzE type; PFAM: Amidase; KEGG: rpa:RPA1469 possible glutamyl-tRNA (Gln) amidotransferase subunit A.
 
 
 0.931
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
 
 
 0.907
Xaut_1323
PFAM: Amidase; KEGG: bja:bll5103 malonamidase E2.
 
 
 0.892
Xaut_1052
PFAM: Amidase; KEGG: bam:Bamb_5348 amidase; Belongs to the amidase family.
 
 
 0.890
Xaut_4705
TIGRFAM: Allophanate hydrolase; PFAM: Amidase; KEGG: bbt:BBta_0724 putative glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A).
 
 
 0.817
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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