STRINGSTRING
LOC101170382 LOC101170382 dctn2 dctn2 actr10 actr10 dctn4 dctn4 dctn5 dctn5 LOC101164183 LOC101164183 DCTN6 DCTN6 LOC101164346 LOC101164346 actl6a actl6a LOC101164086 LOC101164086 ruvbl1 ruvbl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170382Actin, alpha cardiac. (377 aa)    
Predicted Functional Partners:
dctn2
Dynactin 2 (p50).
   
 0.902
actr10
Actin related protein 10; Belongs to the actin family.
   
0.894
dctn4
Dynactin 4.
   
 0.886
dctn5
Dynactin 5.
 
 
 0.874
LOC101164183
Dynactin 3 (p22).
    
 0.826
DCTN6
Dynactin subunit 6.
    
 0.823
LOC101164346
Uncharacterized protein.
    
 0.823
actl6a
Actin-like 6A; Belongs to the actin family.
    
0.794
LOC101164086
Actinin, alpha 2b.
   
 0.787
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.785
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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