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STRINGSTRING
glgB glgB rfbF rfbF dpm1 dpm1 SYNGTS_2253 SYNGTS_2253 SYNGTS_3053 SYNGTS_3053 sll1496 sll1496 glmM glmM epsB epsB slr1076 slr1076 slr1334 slr1334 slr1077 slr1077
"slr1076" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1076Hypothetical protein (381 aa)    
Predicted Functional Partners:
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
  0.956
slr1077
Hypothetical protein (386 aa)
 
          0.954
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
 
   
  0.824
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (770 aa)
     
 
  0.792
epsB
Exopolysaccharide export protein (756 aa)
 
   
  0.776
dpm1
Dolichyl-phosphate-mannose synthase (390 aa)
   
 
  0.770
rfbF
alpha-D-glucose-1-phosphatecytidylyltransferase (256 aa)
   
  0.717
slr1334
Hypothetical protein (490 aa)
   
 
  0.703
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (481 aa)
   
 
  0.703
SYNGTS_3053
Phosphoglucomutase (567 aa)
     
 
  0.695
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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