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STRINGSTRING
corR corR slr1597 slr1597 slr0645 slr0645 slr1911 slr1911 slr0459 slr0459 ssr0349 ssr0349 slr0637 slr0637 sll1447 sll1447 slr0680 slr0680 ssl3549 ssl3549 slr1338 slr1338
"slr1597" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1597Hypothetical protein (298 aa)    
Predicted Functional Partners:
slr0637
Hypothetical protein (261 aa)
   
          0.771
slr0459
Hypothetical protein (474 aa)
 
          0.741
corR
Cobalt-dependent transcriptional regulator (370 aa)
   
 
  0.714
ssr0349
Hypothetical protein (63 aa)
   
          0.710
slr0645
Hypothetical protein (206 aa)
   
          0.705
slr0680
Hypothetical protein (140 aa)
   
          0.696
ssl3549
Hypothetical protein (76 aa)
   
          0.687
sll1447
Hypothetical protein (126 aa)
   
          0.683
slr1911
Hypothetical protein (142 aa)
   
          0.679
slr1338
Hypothetical protein (200 aa)
   
          0.649
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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