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STRINGSTRING
psaF psaF slr0575 slr0575 sll1656 sll1656 slr0565 slr0565 slr1926 slr1926 sll2002 sll2002 slr0483 slr0483 slr1699 slr1699 sll0558 sll0558 slr1702 slr1702 slr1799 slr1799
"slr1699" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1699Hypothetical protein (282 aa)    
Predicted Functional Partners:
slr1702
Hypothetical protein (251 aa)
   
        0.785
slr0565
Hypothetical protein (325 aa)
   
        0.780
sll2002
Hypothetical protein (292 aa)
   
          0.778
sll0558
Hypothetical protein (233 aa)
   
          0.778
psaF
Photosystem I subunit III; Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI (165 aa)
   
          0.776
sll1656
Hypothetical protein (191 aa)
   
          0.776
slr0483
Hypothetical protein (149 aa)
   
          0.774
slr1799
Hypothetical protein (637 aa)
 
          0.772
slr0575
Hypothetical protein (184 aa)
   
          0.771
slr1926
Hypothetical protein (223 aa)
   
          0.770
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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