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sll1488 sll1488 slr1708 slr1708 nlpD nlpD moeB moeB hhoB hhoB prc prc slr0878 slr0878 hhoA hhoA htrA htrA sll1632 sll1632 slr1752 slr1752
"prc" - Carboxyl-terminal protease in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prcCarboxyl-terminal protease (423 aa)    
Predicted Functional Partners:
slr1752
Hypothetical protein (221 aa)
              0.697
sll1488
Hypothetical protein (221 aa)
 
 
  0.695
slr1708
Probable peptidase M23 (411 aa)
 
 
  0.684
hhoB
Protease; A putative protease, its function overlaps that of the related putative proteases HtrA and HhoA (416 aa)
   
   
  0.644
hhoA
Protease; A putative protease, its function overlaps that of the related putative proteases HhoB and HtrA (394 aa)
   
   
  0.643
sll1632
Hypothetical protein (269 aa)
              0.634
nlpD
Lipoprotein NlpD (715 aa)
 
 
  0.631
slr0878
Hypothetical protein (245 aa)
 
 
  0.627
moeB
Molybdopterin biosynthesis protein MoeB (392 aa)
 
        0.604
htrA
Serine protease; A putative protease, its function overlaps that of the related putative proteases HhoA and HhoB (419 aa)
   
   
  0.591
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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