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STRINGSTRING
sll0662 sll0662 ribD ribD sll1507 sll1507 ssl2595 ssl2595 slr0222 slr0222 dspA dspA ssr2806 ssr2806 sml0011 sml0011 slr0947 slr0947 sll1961 sll1961 ssr2595 ssr2595
"ssl2595" - YciI-like-protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl2595YciI-like-protein (89 aa)    
Predicted Functional Partners:
ssr2595
High light inducible protein (70 aa)
   
     
  0.890
sll1961
Hypothetical protein (388 aa)
   
     
  0.841
ribD
Riboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (368 aa)
       
    0.810
dspA
Sensory histidine kinase NblS/DspA/Dfr/Hik33 (663 aa)
           
  0.752
sml0011
Hypothetical protein (107 aa)
   
          0.731
sll0662
Bacterial type ferredoxin family protein (133 aa)
   
          0.719
ssr2806
Hypothetical protein (59 aa)
   
          0.710
sll1507
Hypothetical protein (181 aa)
   
          0.706
slr0947
OmpR subfamily protein Ycf27/Rre26 (234 aa)
         
  0.699
slr0222
Hybrid sensory kinase Hik25/GidA (1178 aa)
           
  0.692
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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