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STRINGSTRING
gltA gltA hdrB hdrB sucD sucD fumC fumC gabD gabD sucC sucC frdA frdA SYNGTS_1195 SYNGTS_1195 sll0254 sll0254 cydA cydA cydB cydB
"SYNGTS_1195" - Succinate dehydrogenase iron-sulphur protein subunit in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_1195Succinate dehydrogenase iron-sulphur protein subunit (331 aa)    
Predicted Functional Partners:
frdA
Succinate dehydrogenase flavoprotein subunit (575 aa)
  0.999
sucD
succinyl-CoA synthetase (302 aa)
 
  0.998
sucC
succinate--CoA ligase (401 aa)
 
  0.998
fumC
Fumarase; Catalyzes the reversible addition of water to fumarate to give L-malate (466 aa)
   
 
  0.992
cydB
Cytochrome oxidase d subunit II (336 aa)
         
  0.982
cydA
Cytochrome oxidase d subunit I (483 aa)
         
  0.982
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate (454 aa)
   
 
  0.972
hdrB
Heterodisulfide reductase subunit B (301 aa)
 
 
  0.972
gltA
Citrate synthase (397 aa)
   
  0.963
sll0254
Hypothetical protein (650 aa)
 
  0.960
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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