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STRINGSTRING
ssl0787 ssl0787 sll1832 sll1832 slr0483 slr0483 slr1724 slr1724 sll0350 sll0350 slr0962 slr0962 ssl1918 ssl1918 slr0459 slr0459 slr1914 slr1914 sll0839 sll0839 pyrF pyrF
"sll0839" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0839Hypothetical protein (197 aa)    
Predicted Functional Partners:
pyrF
Orotidine 5’ monophosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (231 aa)
              0.875
sll1832
Hypothetical protein (152 aa)
   
          0.778
slr1724
Hypothetical protein (264 aa)
   
          0.777
slr0962
Hypothetical protein (477 aa)
   
          0.777
sll0350
Hypothetical protein (803 aa)
   
          0.776
slr0459
Hypothetical protein (474 aa)
   
          0.775
slr0483
Hypothetical protein (149 aa)
   
          0.774
slr1914
Hypothetical protein (118 aa)
   
          0.774
ssl1918
Hypothetical protein (97 aa)
   
          0.774
ssl0787
Hypothetical protein (199 aa)
   
          0.773
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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