Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
gumB gumB sll0574 sll0574 slr0977 slr0977 sll1528 sll1528 kpsM kpsM slr2111 slr2111 ssr2802 ssr2802 SYNGTS_2253 SYNGTS_2253 ssr2803 ssr2803 dpm1 dpm1 slr1076 slr1076
"ssr2802" - ABC transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2802ABC transporter (53 aa)    
Predicted Functional Partners:
slr0977
ABC transporter (276 aa)
 
  0.973
kpsM
Probable polysaccharide ABC transporter permease protein (302 aa)
 
  0.927
sll0574
Probable lipopolysaccharide ABC transporter permease protein (271 aa)
 
  0.903
sll1528
Hypothetical protein (996 aa)
   
 
  0.828
ssr2803
Hypothetical protein (83 aa)
              0.775
dpm1
Dolichyl-phosphate-mannose synthase (390 aa)
         
  0.750
gumB
GumB protein (504 aa)
   
 
  0.715
slr2111
Hypothetical protein (157 aa)
   
   
  0.697
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
       
  0.688
slr1076
Hypothetical protein (381 aa)
 
 
  0.647
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (4%)