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STRINGSTRING
tpiA tpiA slr0784 slr0784 sll0606 sll0606 slr0341 slr0341 glnP glnP slr1201 slr1201 ssl3127 ssl3127 slr1735 slr1735 sll0146 sll0146 amiC amiC natB natB
"slr0341" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0341Hypothetical protein (318 aa)    
Predicted Functional Partners:
slr1735
ABC transporter (252 aa)
 
  0.928
glnP
ABC-type transporter protein (530 aa)
 
  0.917
slr0784
Hypothetical protein (340 aa)
              0.860
sll0606
Hypothetical protein (476 aa)
   
 
  0.822
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (242 aa)
              0.801
natB
Periplasmic binding protein of ABC transporter for natural amino acids (454 aa)
     
 
  0.664
amiC
Negative aliphatic amidase regulator (446 aa)
     
 
  0.664
sll0146
High-affinity branched-chain amino acid transport protein BraE (372 aa)
         
  0.644
ssl3127
Hypothetical protein (75 aa)
         
  0.644
slr1201
Hypothetical protein (410 aa)
         
  0.644
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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