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STRINGSTRING
SYNGTS_0373 SYNGTS_0373 sll0185 sll0185 sll1340 sll1340 ntcA ntcA sll1109 sll1109 ssl0105 ssl0105 slr1122 slr1122 glnB glnB slr0730 slr0730 slr1990 slr1990 sll1071 sll1071
"ssl0105" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl0105Hypothetical protein (88 aa)    
Predicted Functional Partners:
glnB
Nitrogen regulatory protein P-II; P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is phosphorylated, these events are reversed. In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P- II is phosphorylated which allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme (By similarity) (112 aa)
       
 
  0.981
ntcA
Global nitrogen regulator; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control (225 aa)
       
 
  0.896
sll1340
Hypothetical protein (100 aa)
   
          0.778
SYNGTS_0373
High light inducible protein (57 aa)
   
          0.778
slr1122
Hypothetical protein (250 aa)
   
          0.778
slr1990
Hypothetical protein (240 aa)
   
          0.777
sll1071
Hypothetical protein (275 aa)
   
          0.776
sll1109
Hypothetical protein (194 aa)
   
          0.774
sll0185
Hypothetical protein (419 aa)
   
          0.770
slr0730
Hypothetical protein (132 aa)
   
          0.767
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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