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STRINGSTRING
SYNGTS_0056 SYNGTS_0056 glgB glgB SYNGTS_2427 SYNGTS_2427 rfbP rfbP sll1496 sll1496 epsB epsB lpxA lpxA SYNGTS_1686 SYNGTS_1686 gmd gmd SYNGTS_2253 SYNGTS_2253 dpm1 dpm1
"SYNGTS_2427" - Mannosyl transferase in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
SYNGTS_2427Mannosyl transferase (365 aa)    
Predicted Functional Partners:
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
  0.956
lpxA
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (295 aa)
         
  0.908
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (362 aa)
   
   
  0.872
dpm1
Dolichyl-phosphate-mannose synthase (390 aa)
 
 
  0.812
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
       
  0.804
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (770 aa)
     
 
  0.792
epsB
Exopolysaccharide export protein (756 aa)
 
   
  0.775
SYNGTS_0056
UDP-N-acetyl-D-mannosaminuronic acid transferase (251 aa)
   
 
  0.765
SYNGTS_1686
GDP-mannose pyrophosphorylase (356 aa)
 
   
  0.765
rfbP
Galactosyl-1-phosphate transferase (243 aa)
 
   
  0.750
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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