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petD petD sll1503 sll1503 carB carB petB petB ssl0738 ssl0738 sll1157 sll1157 sll0371 sll0371 sll0236 sll0236 slr2096 slr2096 slr1903 slr1903 sll0847 sll0847
"sll0371" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0371Hypothetical protein (521 aa)    
Predicted Functional Partners:
sll1503
Hypothetical protein (508 aa)
   
          0.735
carB
Carbamoyl-phosphate synthase,pyrimidine-specific, large chain (1081 aa)
              0.654
ssl0738
Hypothetical protein (72 aa)
              0.587
slr2096
Transposase (138 aa)
   
          0.583
sll1157
Transposase (138 aa)
   
          0.563
sll0236
Hypothetical protein (558 aa)
   
          0.554
slr1903
Transposase (138 aa)
   
          0.530
petD
Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (160 aa)
     
   
  0.501
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (222 aa)
     
   
  0.501
sll0847
Hypothetical protein (201 aa)
   
          0.489
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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