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sll0398 sll0398 pyk1 pyk1 pyk2 pyk2 dnaX dnaX dnaE-N dnaE-N sll0544 sll0544 ndk ndk dnaN dnaN SYNGTS_0667 SYNGTS_0667 SYNGTS_1915 SYNGTS_1915 sll1258 sll1258
"sll0544" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0544Hypothetical protein (333 aa)    
Predicted Functional Partners:
dnaX
DNA polymerase III subunit (1116 aa)
 
  0.993
SYNGTS_1915
DNA polymerase III subunit (319 aa)
   
  0.991
dnaN
DNA polymerase III beta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (By similarity) (391 aa)
 
  0.989
dnaE-N
DNA polymerase III alpha subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The alpha chain is the DNA polymerase (By similarity) (897 aa)
   
  0.985
SYNGTS_0667
DNA polymerase III alpha subunit (458 aa)
   
  0.983
pyk1
Pyruvate kinase (483 aa)
       
    0.902
pyk2
Pyruvate kinase (591 aa)
       
    0.902
sll1258
Hypothetical protein (193 aa)
     
 
    0.901
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity) (149 aa)
       
    0.900
sll0398
dGTP triphosphohydrolase (440 aa)
         
    0.900
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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