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STRINGSTRING
cynS cynS ppc ppc slr1347 slr1347 acpP acpP sll0834 sll0834 slr1403 slr1403 cmpA cmpA slr1302 slr1302 slr1149 slr1149 slr1512 slr1512 slr1513 slr1513
"sll0834" - Low affinity sulfate transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0834Low affinity sulfate transporter (564 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
     
      0.832
slr1512
Hypothetical protein (374 aa)
         
  0.698
slr1302
Hypothetical protein (409 aa)
   
     
  0.683
slr1403
Integrin alpha- and beta4- subunit domain homolog (3016 aa)
           
  0.668
slr1513
Hypothetical protein (110 aa)
           
  0.664
cmpA
Bicarbonate transporter; Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Binds bicarbonate with high affinity (By similarity) (452 aa)
           
  0.663
slr1347
Carbonic anhydrase; Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation (311 aa)
 
   
  0.652
slr1149
ABC transporter (601 aa)
     
 
  0.638
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (1034 aa)
     
 
    0.633
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide (149 aa)
       
  0.631
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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