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gabD gabD cydA cydA gltA gltA SYNGTS_2571 SYNGTS_2571 cydB cydB frdA frdA sucC sucC petC1 petC1 sucD sucD fumC fumC petC petC
"SYNGTS_2571" - Succinate dehydrogenase iron-sulfur protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
SYNGTS_2571Succinate dehydrogenase iron-sulfur protein (245 aa)    
Predicted Functional Partners:
frdA
Succinate dehydrogenase flavoprotein subunit (575 aa)
  0.999
sucD
succinyl-CoA synthetase (302 aa)
 
  0.998
sucC
succinate--CoA ligase (401 aa)
 
  0.998
fumC
Fumarase; Catalyzes the reversible addition of water to fumarate to give L-malate (466 aa)
   
 
  0.989
cydB
Cytochrome oxidase d subunit II (336 aa)
         
  0.973
cydA
Cytochrome oxidase d subunit I (483 aa)
         
  0.972
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate (454 aa)
   
 
  0.971
gltA
Citrate synthase (397 aa)
   
  0.963
petC1
Cytochrome b6/f-complex iron-sulfur protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (178 aa)
   
  0.954
petC
Cytochrome b6/f complex iron-sulfur subunit (133 aa)
   
  0.954
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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