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STRINGSTRING
sll1965 sll1965 sll1774 sll1774 sll1201 sll1201 sll0765 sll0765 crtO crtO slr0095 slr0095 typA typA pma1 pma1 slr0096 slr0096 slr0092 slr0092 slr0093 slr0093
"slr0095" - O-methyltransferase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0095O-methyltransferase (220 aa)    
Predicted Functional Partners:
slr0092
Hypothetical protein (257 aa)
         
  0.959
slr0093
DnaJ protein (332 aa)
         
  0.930
pma1
Cation-transporting ATPase E1-E2 ATPase; Could mediate calcium influx (905 aa)
     
   
  0.921
sll1965
Hypothetical protein (136 aa)
   
     
  0.790
crtO
B-carotene ketolase (542 aa)
 
     
  0.775
slr0096
Low affinity sulfate transporter (556 aa)
         
  0.762
sll1774
Hypothetical protein (260 aa)
         
  0.760
sll1201
Hypothetical protein (264 aa)
         
  0.760
typA
Elongation factor EF-G; Not known; probably interacts with the ribosomes in a GTP dependent manner (597 aa)
 
     
  0.715
sll0765
Hypothetical protein (278 aa)
 
        0.677
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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