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STRINGSTRING
slr1659 slr1659 slr1658 slr1658 slr1861 slr1861 slr0114 slr0114 sll0012 sll0012 sll1770 sll1770 sll1771 sll1771 sll1033 sll1033 sll0602 sll0602 sll1387 sll1387 SYNGTS_2018 SYNGTS_2018
"slr0114" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0114Hypothetical protein (510 aa)    
Predicted Functional Partners:
SYNGTS_2018
No annotation available (261 aa)
           
  0.826
sll1770
ABC1-like (585 aa)
           
  0.824
slr1658
Hypothetical protein (199 aa)
 
          0.777
slr1659
Hypothetical protein (113 aa)
 
          0.776
sll0602
Hypothetical protein (691 aa)
           
  0.768
sll0012
Transposase (261 aa)
           
  0.759
sll1387
Hypothetical protein (254 aa)
           
  0.759
sll1771
Hypothetical protein (254 aa)
           
  0.758
sll1033
Hypothetical protein (668 aa)
           
  0.754
slr1861
Hypothetical protein (143 aa)
   
          0.704
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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