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STRINGSTRING
slr1866 slr1866 slr0031 slr0031 sll0039 sll0039 sll0038 sll0038 sll0043 sll0043 sll0040 sll0040 sll0041 sll0041 mcpA mcpA sll1296 sll1296 slr0322 slr0322 tar tar
"sll0040" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0040Hypothetical protein (182 aa)    
Predicted Functional Partners:
sll0043
CheA like protein Hik18 (1402 aa)
 
  0.999
sll0041
Phytochrome-like photoreceptor protein for positive phototaxis (1000 aa)
 
  0.999
sll0038
PatA subfamily protein PixG/PisG/TaxP1/Rer1/Rre36; Controls heterocyst pattern formation (402 aa)
 
  0.998
sll0039
CheY subfamily protein PixH/PisH/Rre35 (119 aa)
       
  0.991
slr0322
CheA-like protein PilL/TaxAY3/Hik43 (1095 aa)
 
 
  0.982
sll1296
CheA-like protein Hik39/TasAY2 (924 aa)
   
 
  0.978
tar
Methyl-accepting chemotaxis protein II (163 aa)
 
 
  0.964
mcpA
Methyl-accepting chemotaxis protein (869 aa)
 
 
  0.953
slr0031
Hypothetical protein (584 aa)
         
  0.940
slr1866
Hypothetical protein (333 aa)
   
 
  0.936
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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