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sll0498 sll0498 slr1977 slr1977 slr1024 slr1024 sll1049 sll1049 sll1902 sll1902 sll0497 sll0497 apcE apcE ssl3712 ssl3712 cpcF cpcF apcC apcC sll1845 sll1845
"sll0497" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0497Hypothetical protein (275 aa)    
Predicted Functional Partners:
sll0498
Hypothetical protein (150 aa)
 
          0.802
apcE
Phycobilisome LCM core-membrane linker polypeptide ApcE; This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity) (896 aa)
   
          0.766
cpcF
Phycocyanin alpha phycocyanobilin lyase CpcF; Required for the chromophorylation of the cpcA gene product (214 aa)
   
          0.723
sll1049
Hypothetical protein (564 aa)
   
          0.702
sll1902
Hypothetical protein (399 aa)
   
          0.691
ssl3712
Hypothetical protein (84 aa)
   
          0.670
slr1024
Hypothetical protein (213 aa)
   
          0.645
slr1977
Hypothetical protein (244 aa)
   
          0.603
apcC
Phycobilisome LC linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (By similarity) (67 aa)
   
          0.600
sll1845
Hypothetical protein (159 aa)
   
          0.588
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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