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dapF dapF argH argH rpmH rpmH speA1 speA1 lysA lysA napC napC rpsT rpsT speA2 speA2 speB2 speB2 slr0049 slr0049 speB1 speB1
"speA1" - Arginine decarboxylase in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
speA1Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (695 aa)    
Predicted Functional Partners:
speB1
Arginase (306 aa)
 
  0.996
speB2
Agmatine ureohydrolase (390 aa)
   
  0.994
argH
L-argininosuccinate lyase (461 aa)
         
  0.933
rpmH
50S ribosomal protein L34 (45 aa)
     
      0.813
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (97 aa)
       
      0.813
speA2
Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (659 aa)
   
   
0.805
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
         
  0.652
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (469 aa)
         
  0.619
napC
Carboxynorspermidine decarboxylase (387 aa)
 
     
  0.568
slr0049
Hypothetical protein (398 aa)
 
     
  0.559
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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