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STRINGSTRING
sll1485 sll1485 sll1486 sll1486 sll0647 sll0647 slr1959 slr1959 slr1567 slr1567 sll0068 sll0068 sll1222 sll1222 sll0038 sll0038 sll0980 sll0980 slr0670 slr0670 sll1586 sll1586
"slr1567" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1567Hypothetical protein (765 aa)    
Predicted Functional Partners:
sll0068
Hypothetical protein (1239 aa)
   
          0.766
slr1959
Hypothetical protein (827 aa)
   
          0.726
sll0647
Hypothetical protein (256 aa)
   
          0.712
sll1586
Hypothetical protein (1749 aa)
   
          0.693
sll1485
Hypothetical protein (162 aa)
   
          0.680
sll0038
PatA subfamily protein PixG/PisG/TaxP1/Rer1/Rre36; Controls heterocyst pattern formation (402 aa)
   
          0.679
sll0980
Hypothetical protein (396 aa)
   
          0.679
sll1486
Hypothetical protein (265 aa)
   
          0.674
sll1222
Hypothetical protein (212 aa)
   
          0.659
slr0670
Hypothetical protein (291 aa)
   
          0.639
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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