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PGK2 PGK2 PGI1 PGI1 FBA4 FBA4 TRK1 TRK1 TPIC TPIC FBA2 FBA2 PGH1 PGH1 GAP1a GAP1a FBA3 FBA3 FBA1 FBA1 PGK1 PGK1
"GAP1a" - Glyceraldehyde 3-phosphate dehydrogenase, dominant splicing variant in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP1aGlyceraldehyde 3-phosphate dehydrogenase, dominant splicing variant (371 aa)    
Predicted Functional Partners:
PGK1
Phosphoglycerate kinase (462 aa)
   
  0.999
TPIC
Triose phosphate isomerase (282 aa)
 
  0.999
PGK2
Phosphoglycerate kinase (465 aa)
   
  0.994
PGH1
Enolase (477 aa)
   
  0.992
TRK1
Transketolase (718 aa)
   
  0.990
FBA4
Fructose-1,6-bisphosphate aldolase (421 aa)
   
  0.988
FBA2
Fructose-1,6-bisphosphate aldolase (370 aa)
   
  0.988
FBA1
Fructose-1,6-bisphosphate aldolase (391 aa)
   
  0.985
FBA3
Fructose-1,6-bisphosphate aldolase (377 aa)
   
  0.985
PGI1
Phosphoglucose isomerase (646 aa)
   
 
  0.959
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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