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STRINGSTRING
EDP03429 EDP03429 EDP08197 EDP08197 EDO97312 EDO97312 EDO96756 EDO96756 EDO99099 EDO99099 CPLD44 CPLD44 TOP2 TOP2 EDP05064 EDP05064 SBE1 SBE1 GSN1 GSN1 SBE2 SBE2
"EDO96756" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96756Predicted protein (472 aa)    
Predicted Functional Partners:
EDO99099
Predicted protein (507 aa)
       
  0.642
SBE1
Starch branching enzyme (690 aa)
     
      0.529
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
     
   
  0.474
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
         
  0.464
CPLD44
Thylakoid lumenal protein (239 aa)
       
      0.453
EDP08197
Predicted protein (300 aa)
   
 
    0.442
EDO97312
Predicted protein (1288 aa)
       
  0.424
EDP05064
Riboflavin kinase (421 aa)
   
   
  0.423
EDP03429
Predicted protein (348 aa)
     
 
    0.410
SBE2
Starch branching enzyme (788 aa)
       
      0.410
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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