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STRINGSTRING
CYN18-2 CYN18-2 PRP8 PRP8 EDP05779 EDP05779 PRP19 PRP19 SMP2 SMP2 EFG2 EFG2 EDP09509 EDP09509 EDO96468 EDO96468 PRP17 PRP17 EDP03322 EDP03322 SMP3 SMP3
"CYN18-2" - Peptidyl-prolyl cis-trans isomerase, cyclophilin-type in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYN18-2Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (157 aa)    
Predicted Functional Partners:
EDP03322
Predicted protein (811 aa)
       
  0.984
EDP09509
Predicted protein (494 aa)
     
  0.984
EDP05779
Predicted protein (150 aa)
     
  0.983
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.981
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.976
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
       
  0.971
EFG2
Elongation factor 2 (845 aa)
   
  0.966
EDO96468
RNA helicase, activating signal cointegrator 1 (2169 aa)
       
  0.957
SMP3
Small nuclear ribonucleoprotein E (87 aa)
     
  0.913
SMP2
Small nuclear ribonucleoprotein polypeptide G (77 aa)
     
    0.912
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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