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STRINGSTRING
EDP05644 EDP05644 EDO98797 EDO98797 EDP04475 EDP04475 EDP06729 EDP06729 EDP05032 EDP05032 EDP07365 EDP07365 EDO96960 EDO96960 EDP00856 EDP00856 EDP03231 EDP03231 GTR16 GTR16 EDP07775 EDP07775
"EDO96960" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96960Predicted protein (663 aa)    
Predicted Functional Partners:
EDO98797
Predicted protein (370 aa)
     
        0.480
EDP06729
Predicted protein (526 aa)
     
        0.475
EDP00856
Predicted protein (456 aa)
     
        0.434
EDP07365
Predicted protein (293 aa)
     
        0.428
EDP05644
3-ketoacyl-CoA-synthase (474 aa)
     
        0.427
GTR16
Glycosyl transferase (475 aa)
     
        0.426
EDP07775
Predicted protein (1113 aa)
     
        0.416
EDP05032
Predicted protein (962 aa)
     
        0.413
EDP03231
Predicted protein (1072 aa)
     
        0.409
EDP04475
Predicted protein (617 aa)
     
        0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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