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STRINGSTRING
EDP02056 EDP02056 KDG1 KDG1 EDP09106 EDP09106 LCA1 LCA1 KDG3 KDG3 SQD2 SQD2 SQD3 SQD3 LIPG2 LIPG2 EDP04893 EDP04893 EDP05180 EDP05180 CGLD24 CGLD24
"LIPG2" - Triacylglycerol lipase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPG2Triacylglycerol lipase (390 aa)    
Predicted Functional Partners:
EDP05180
Predicted protein (346 aa)
     
 
  0.974
EDP02056
Predicted protein (324 aa)
     
 
  0.974
CGLD24
Diacylglycerol acyl transferase (327 aa)
     
 
  0.968
EDP04893
Predicted protein (440 aa)
   
 
  0.939
LCA1
Lecithin-cholesterol acyltransferase (856 aa)
         
  0.935
SQD2
Sulfolipid synthase (402 aa)
       
  0.908
SQD3
Sulfolipid synthase (395 aa)
       
  0.908
KDG1
Diacylglycerol kinase (879 aa)
     
 
    0.907
KDG3
Diacylglycerol kinase (186 aa)
     
 
    0.902
EDP09106
Predicted protein (377 aa)
         
  0.901
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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