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AP1G1 AP1G1 CHC1 CHC1 STPK7 STPK7 AP2S2 AP2S2 AP1M1 AP1M1 AP4S4 AP4S4 AP4B4 AP4B4 AP2A1 AP2A1 EDO95784 EDO95784 AP1S1 AP1S1 AP4E1 AP4E1
"AP4B4" - Beta-4-adaptin in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP4B4Beta-4-adaptin (858 aa)    
Predicted Functional Partners:
AP1M1
Mu1-Adaptin (425 aa)
     
  0.991
AP1G1
Gamma-adaptin (850 aa)
     
  0.987
AP2A1
Alpha-adaptin (953 aa)
     
  0.985
AP4E1
Epsilon-adaptin (925 aa)
     
  0.982
AP2S2
Sigma2-Adaptin (143 aa)
     
  0.980
AP1S1
Sigma1-Adaptin (158 aa)
     
  0.979
AP4S4
Sigma4-Adaptin (144 aa)
     
  0.968
STPK7
Serine/threonine protein kinase 7 (398 aa)
     
  0.952
CHC1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1738 aa)
     
  0.918
EDO95784
Predicted protein (122 aa)
     
  0.918
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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