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STRINGSTRING
MFT4 MFT4 RABH1 RABH1 EDP05864 EDP05864 EDO98460 EDO98460 EDP05430 EDP05430 EDO97960 EDO97960 EDP00224 EDP00224 EDP06823 EDP06823 EDO96508 EDO96508 EDP00849 EDP00849 EDP02562 EDP02562
"EDO97960" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97960Predicted protein (516 aa)    
Predicted Functional Partners:
EDP05430
Predicted protein (879 aa)
     
        0.527
EDP00224
Peptidylglycine alpha-amidating monooxygenase (870 aa)
     
        0.519
EDP06823
Predicted protein (467 aa)
     
        0.508
EDP05864
Predicted protein (501 aa)
     
        0.480
MFT4
MATE efflux family protein (501 aa)
     
        0.475
EDO96508
Predicted protein (1454 aa)
     
        0.449
RABH1
Small rab-related GTPase (211 aa)
     
        0.427
EDP00849
Predicted protein (796 aa)
     
        0.427
EDO98460
EMB30/GNOM-like protein (1490 aa)
     
        0.427
EDP02562
Predicted protein (455 aa)
     
        0.426
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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