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EDO98148 EDO98148 MLH1 MLH1 EDO98690 EDO98690 EDP04177 EDP04177 EDO98431 EDO98431 EDP06305 EDP06305 PCN1 PCN1 EDO97259 EDO97259 RECA RECA EDP04478 EDP04478 FEN1 FEN1
"EDO98148" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98148Predicted protein (96 aa)    
Predicted Functional Partners:
MLH1
Mismatch repair protein (1007 aa)
 
  0.960
EDO98431
Predicted protein (86 aa)
   
  0.924
EDP04177
Predicted protein (193 aa)
   
  0.916
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.870
EDO97259
Predicted protein (294 aa)
   
  0.766
EDP06305
Predicted protein (119 aa)
   
  0.762
FEN1
Nuclease, Rad2 family; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as [...] (396 aa)
   
  0.762
EDO98690
Predicted protein (440 aa)
   
  0.762
RECA
Chloroplast RecA recombination protein (415 aa)
   
  0.752
EDP04478
RecA-like protein (238 aa)
   
  0.752
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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