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STRINGSTRING
EDO95677 EDO95677 EDP06016 EDP06016 EDP02840 EDP02840 EDP04257 EDP04257 EDP03608 EDP03608 EDO98284 EDO98284 EDP04156 EDP04156 EDO99773 EDO99773 ccsA ccsA EDP02598 EDP02598 EDO99277 EDO99277
"EDO98284" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98284Predicted protein (195 aa)    
Predicted Functional Partners:
EDO95677
Predicted protein (142 aa)
   
  0.724
EDP06016
Predicted protein (627 aa)
 
0.673
EDP03608
Predicted protein (630 aa)
 
0.667
EDO99277
Predicted protein (1305 aa)
   
0.647
EDP02840
Predicted protein (879 aa)
   
0.645
EDP02598
Predicted protein (1341 aa)
   
0.640
EDP04257
PDR-like ABC transporter (1337 aa)
   
0.639
EDP04156
Predicted protein (1334 aa)
   
0.639
EDO99773
ABC transporter (1379 aa)
   
0.638
ccsA
Heme attachment protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (353 aa)
       
  0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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