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DEH1 DEH1 EDP06543 EDP06543 RB47 RB47 EDO98311 EDO98311 EDP05831 EDP05831 EDO99505 EDO99505 EDP09509 EDP09509 EDO97364 EDO97364 EDO97736 EDO97736 SSA7 SSA7 EDP01981 EDP01981
"EDO98311" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98311Predicted protein (1716 aa)    
Predicted Functional Partners:
RB47
Polyadenylate-binding protein RB47; Binds the poly(A) tail of mRNA (636 aa)
     
 
  0.934
EDP06543
Predicted protein (179 aa)
     
 
  0.908
EDO99505
Predicted protein (1212 aa)
     
 
  0.734
EDO97736
Predicted protein (865 aa)
     
      0.575
DEH1
Cytoplasmic DExD/H-box RNA helicase (405 aa)
     
 
  0.569
SSA7
Predicted protein (765 aa)
     
        0.558
EDP09509
Predicted protein (494 aa)
     
        0.553
EDP05831
Predicted protein (156 aa)
     
      0.545
EDP01981
Predicted protein (110 aa)
     
      0.543
EDO97364
Predicted protein (1074 aa)
     
        0.540
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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