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STRINGSTRING
MOT27 MOT27 EDP00512 EDP00512 EDP04338 EDP04338 AML1 AML1 EDO98417 EDO98417 EDP02568 EDP02568 EDP03683 EDP03683 EDP01717 EDP01717
"EDO98417" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98417Predicted protein (279 aa)    
Predicted Functional Partners:
AML1
RNA-binding protein (1003 aa)
     
        0.479
EDP02568
Predicted protein (320 aa)
     
        0.475
EDP03683
Predicted protein (81 aa)
     
        0.429
EDP01717
Predicted protein (446 aa)
     
        0.428
EDP04338
Predicted protein (346 aa)
     
        0.426
MOT27
Predicted protein (573 aa)
     
        0.425
EDP00512
Predicted protein (347 aa)
     
        0.413
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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