Full Link:
STRINGSTRING
VPS34 VPS34 APG3 APG3 APG6 APG6 SMG1 SMG1 EDP09841 EDP09841 APG12 APG12 EDP02226 EDP02226 EDO98453 EDO98453 EDO97620 EDO97620 LST8 LST8 TOR1 TOR1
"EDO98453" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98453Predicted protein (259 aa)    
Predicted Functional Partners:
EDP02226
Apg1/Unc-51-like serine-threonine kinase (749 aa)
     
  0.912
APG6
Autophagy protein (495 aa)
     
 
  0.829
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
 
  0.639
APG12
Autophagy protein; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
     
   
  0.634
APG3
Autophagy protein (306 aa)
     
   
  0.598
LST8
TOR kinase binding protein (315 aa)
     
 
  0.598
EDO97620
TOR binding partner raptor (289 aa)
         
  0.561
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
         
  0.555
TOR1
Target of rapamycin, growth-regulatory PI3K-like protein kinase (1696 aa)
         
  0.555
EDP09841
Predicted protein (1700 aa)
     
 
    0.553
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (2%)