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EDP08161 EDP08161 EDO97399 EDO97399 APG8 APG8 EDP07531 EDP07531 APG4 APG4 APG12 APG12 APG7 APG7 EDP02226 EDP02226 UBA1 UBA1 APG5 APG5 APG3 APG3
"APG8" - Autophagy protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG8Autophagy protein (134 aa)    
Predicted Functional Partners:
APG7
Autophagy protein (605 aa)
     
  0.997
APG3
Autophagy protein (306 aa)
     
  0.990
APG4
Autophagy protein (484 aa)
     
  0.983
EDO97399
Predicted protein (761 aa)
       
 
  0.967
APG5
Autophagy protein; Required for autophagy (234 aa)
       
  0.952
EDP02226
Apg1/Unc-51-like serine-threonine kinase (749 aa)
     
 
  0.919
EDP08161
Predicted protein (430 aa)
       
 
  0.914
APG12
Autophagy protein; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
     
  0.912
EDP07531
Predicted protein (349 aa)
     
  0.893
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
  0.878
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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