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STRINGSTRING
PDE4 PDE4 PDE2 PDE2 EDP03412 EDP03412 FAP155 FAP155 CGK2 CGK2 CGK1 CGK1 PDE3 PDE3 EDO98870 EDO98870 PDE1 PDE1 FAP295 FAP295 EDO98015 EDO98015
"EDO98870" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98870Predicted protein (299 aa)    
Predicted Functional Partners:
EDP03412
Predicted protein (203 aa)
 
 
  0.988
CGK1
cGMP-dependent protein kinase (305 aa)
   
0.878
EDO98015
Predicted protein (720 aa)
     
0.857
FAP295
Cyclic nucleotide dependent protein kinase (718 aa)
     
0.856
CGK2
cGMP-dependent protein kinase (1027 aa)
     
0.855
FAP155
Flagellar associated protein (390 aa)
     
  0.825
PDE4
3’,5’-cyclic-nucleotide phosphodiesterase (305 aa)
     
  0.802
PDE3
3’,5’-cyclic-nucleotide phosphodiesterase (289 aa)
     
  0.802
PDE2
3’,5’-cyclic-nucleotide phosphodiesterase (297 aa)
     
  0.802
PDE1
3’,5’-cyclic-nucleotide phosphodiesterase (287 aa)
     
  0.802
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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