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STRINGSTRING
POLA4 POLA4 EDP03106 EDP03106 LIG1 LIG1 EDO99062 EDO99062 CrCDPK1 CrCDPK1 TATA TATA CAM1 CAM1
"EDO99062" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99062Predicted protein (162 aa)    
Predicted Functional Partners:
CrCDPK1
Calcium-dependent protein kinase (484 aa)
           
  0.712
TATA
TatA-like sec-independent protein translocator subunit (114 aa)
           
  0.711
EDP03106
Gelsolin (736 aa)
           
  0.571
CAM1
Calmodulin (163 aa)
           
  0.570
POLA4
Primase subunit of DNA polymerase alpha (458 aa)
           
  0.474
LIG1
DNA ligase (813 aa)
           
  0.463
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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