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STRINGSTRING
EDO97885 EDO97885 EDP03270 EDP03270 EDP03936 EDP03936 RNPH3 RNPH3 EDP04787 EDP04787 EDP02427 EDP02427 EDP05239 EDP05239 EDO97119 EDO97119 EDP00626 EDP00626 EDO99461 EDO99461 EDP03014 EDP03014
"EDO99461" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99461Predicted protein (347 aa)    
Predicted Functional Partners:
EDP02427
Predicted protein (825 aa)
     
        0.658
EDP03270
RimM-like protein (181 aa)
     
        0.653
EDP03936
Predicted protein (338 aa)
     
        0.650
EDP00626
Predicted protein (178 aa)
     
        0.633
EDP03014
Predicted protein (343 aa)
     
        0.607
EDO97119
Predicted protein (367 aa)
     
        0.605
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
        0.585
EDO97885
Predicted protein (497 aa)
     
        0.585
EDP05239
Predicted protein (543 aa)
     
        0.573
EDP04787
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
        0.565
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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