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SCC3 SCC3 EDP00838 EDP00838 EDO99556 EDO99556 SMC1 SMC1 SMC5B SMC5B SMC5A SMC5A SMC3 SMC3 EDP00909 EDP00909 SMC4 SMC4 SMC6B SMC6B SMC6A SMC6A
"EDO99556" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99556Predicted protein (1601 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein 3 (1121 aa)
     
  0.987
SCC3
Cohesin complex subunit (1259 aa)
     
  0.972
SMC1
Structural maintenance of chromosomes protein 1 (818 aa)
     
  0.970
EDP00909
Cohesin subunit SCC1b (304 aa)
     
  0.962
EDP00838
Cohesin subunit SCC1a (556 aa)
     
  0.962
SMC6B
Structural maintenance of chromosomes protein 6B (1106 aa)
     
  0.886
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
     
  0.885
SMC6A
Structural maintenance of chromosomes protein 6A (1207 aa)
     
  0.883
SMC5B
Structural maintenance of chromosomes protein 5B (1124 aa)
     
  0.871
SMC5A
Structural maintenance of chromosomes protein 5A (940 aa)
     
  0.871
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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