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RNPH1 RNPH1 EDO98866 EDO98866 ADH1 ADH1 FAP42 FAP42 RRP46 RRP46 EDP05600 EDP05600 EDO99629 EDO99629 EFG5 EFG5 EDP00676 EDP00676 SRRB1 SRRB1 EDP04430 EDP04430
"EDO99629" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99629Predicted protein (117 aa)    
Predicted Functional Partners:
EDP05600
DNA topoisomerase-like protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (772 aa)
              0.555
RRP46
Exosome complex exonuclease (242 aa)
       
    0.554
RNPH1
3’-5’ exoribonuclease PH component of the exosome (245 aa)
       
    0.554
EDO98866
Predicted protein (476 aa)
   
  0.445
ADH1
Dual function alcohol dehydrogenase / acetaldehyde dehydrogenase (954 aa)
   
  0.445
FAP42
Flagellar associated protein, adenylate/guanylate kinase-like protein (2457 aa)
         
  0.439
EFG5
Elongation factor EF-Tu-like protein (989 aa)
   
  0.436
EDP04430
Predicted protein (123 aa)
       
      0.430
EDP00676
Predicted protein (256 aa)
       
      0.430
SRRB1
Beta subunit of the SRP receptor (238 aa)
       
      0.430
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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