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STRINGSTRING
CPL9 CPL9 CPLD5 CPLD5 GUN4 GUN4 EDP09648 EDP09648 CPLD38 CPLD38 EDO99633 EDO99633 EDP02917 EDP02917 TAB2 TAB2 CGLD27 CGLD27 EDO96439 EDO96439 LDR2 LDR2
"EDO99633" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99633Predicted protein (309 aa)    
Predicted Functional Partners:
TAB2
PsaB RNA binding protein (358 aa)
   
        0.579
CPLD38
Predicted protein (190 aa)
   
        0.535
CPLD5
Predicted protein (218 aa)
   
        0.529
GUN4
Tetrapyrrole-binding protein (260 aa)
   
          0.522
EDO96439
Predicted protein (144 aa)
   
          0.516
LDR2
Thioredoxin-like protein (124 aa)
   
          0.515
EDP02917
Predicted protein (148 aa)
   
          0.510
CPL9
Predicted protein (250 aa)
   
          0.508
EDP09648
Predicted protein (99 aa)
   
          0.505
CGLD27
Predicted protein (283 aa)
   
          0.499
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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