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CKS1 CKS1 EDP05772 EDP05772 NOT2 NOT2 PUL1 PUL1 EDP02832 EDP02832 AMYA2 AMYA2 DPE1 DPE1 ISA2 ISA2 SBE2 SBE2 SBE3 SBE3 SBE1 SBE1
"PUL1" - Pullulanase-type starch debranching enzyme in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUL1Pullulanase-type starch debranching enzyme (868 aa)    
Predicted Functional Partners:
ISA2
Isoamylase-type starch debranching enzyme (876 aa)
   
 
  0.955
SBE1
Starch branching enzyme (690 aa)
   
 
  0.937
SBE2
Starch branching enzyme (788 aa)
   
 
  0.909
SBE3
Starch branching enzyme (747 aa)
   
 
  0.905
AMYA2
Alpha-amylase (413 aa)
 
 
  0.875
EDP02832
Predicted protein (626 aa)
 
 
  0.830
CKS1
Cyclin dependent kinase regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (88 aa)
       
      0.828
DPE1
4-alpha-glucanotransferase (941 aa)
   
 
  0.799
NOT2
Predicted protein (721 aa)
     
   
  0.790
EDP05772
Transposase (903 aa)
           
  0.779
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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