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EDP04291 EDP04291 EDP01282 EDP01282 AGT2 AGT2 ACS3 ACS3 ACS1 ACS1 ACS2 ACS2 EDP05401 EDP05401 EDP01280 EDP01280 EDP02149 EDP02149 ATO1 ATO1 EDP02040 EDP02040
"EDP01280" - Methylmalonate semi-aldehyde dehydrogenase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01280Methylmalonate semi-aldehyde dehydrogenase (553 aa)    
Predicted Functional Partners:
ACS3
Acetyl CoA synthetase (667 aa)
     
 
    0.951
EDP05401
Aldehyde dehydrogenase (536 aa)
   
0.947
ACS2
Acetyl CoA synthetase (699 aa)
     
 
    0.940
ACS1
Acetyl CoA synthetase (664 aa)
     
 
    0.938
AGT2
Alanine-glyoxylate transaminase (488 aa)
   
 
  0.932
EDP02040
Predicted protein (418 aa)
     
 
    0.921
EDP04291
Predicted protein (156 aa)
     
 
  0.915
ATO1
acetyl-CoA acyltransferase (461 aa)
     
 
    0.914
EDP02149
malonyl-CoA decarboxylase (451 aa)
     
 
    0.903
EDP01282
acyl-CoA dehydrogenase (785 aa)
     
 
    0.902
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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