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STRINGSTRING
EDP09454 EDP09454 EDP09455 EDP09455 AGO1 AGO1 EDO96592 EDO96592 EDP05881 EDP05881 EDP01341 EDP01341 AOC4 AOC4 SEC6 SEC6 EDO98499 EDO98499 EDP07031 EDP07031 EDP01689 EDP01689
"EDP01341" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP01341Predicted protein (477 aa)    
Predicted Functional Partners:
AGO1
Argonaute protein (1023 aa)
     
        0.518
EDO96592
Predicted protein (391 aa)
     
        0.509
EDO98499
Predicted protein (1092 aa)
     
        0.502
AOC4
Amino acid carrier 4 (265 aa)
   
        0.481
EDP01689
Predicted protein (399 aa)
     
        0.477
SEC6
Component of the exocyst complex (763 aa)
     
        0.477
EDP09455
Predicted protein (873 aa)
     
        0.476
EDP09454
Predicted protein (997 aa)
     
        0.475
EDP07031
Predicted protein (476 aa)
     
        0.475
EDP05881
Predicted protein (1036 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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