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EDP05989 EDP05989 EDP05127 EDP05127 EDP02095 EDP02095 EDO97911 EDO97911 EDP05135 EDP05135 EDO98460 EDO98460 ANK28 ANK28 RJL1 RJL1 RABH1 RABH1 MAPKKK9 MAPKKK9 GDIC1 GDIC1
"RJL1" - Small rab-related GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RJL1Small rab-related GTPase (182 aa)    
Predicted Functional Partners:
ANK28
Predicted protein (501 aa)
       
  0.858
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.820
RABH1
Small rab-related GTPase (211 aa)
   
0.817
EDP05127
Smilar to phosphatidylinositol 3-or 4-kinase (1431 aa)
     
  0.794
MAPKKK9
Mitogen activated protein kinase kinase kinase 9 (1160 aa)
       
  0.780
EDO97911
Predicted protein (1043 aa)
       
  0.780
GDIC1
Rab GDP dissociation inhibitor protein (442 aa)
     
  0.773
EDP05989
SEC7/BIG-like ARF-GEF (1046 aa)
       
  0.769
EDP02095
SEC7/BIG-like ARF-guanine nucleotide exchange factor (2150 aa)
       
  0.769
EDO98460
EMB30/GNOM-like protein (1490 aa)
       
  0.769
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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