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DPS1 DPS1 THS1 THS1 DPD1 DPD1 ASK1 ASK1 CDKA1 CDKA1 ASSD1 ASSD1 AHD1 AHD1 HSD1 HSD1 CYCD1 CYCD1 TOP2 TOP2 HSK1 HSK1
"ASSD1" - Aspartate semialdehyde dehydrogenase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASSD1Aspartate semialdehyde dehydrogenase (370 aa)    
Predicted Functional Partners:
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
   
  0.999
ASK1
Aspartate kinase (545 aa)
   
 
  0.994
HSD1
Homoserine dehydrogenase (416 aa)
   
  0.991
CDKA1
Cyclin dependent protein kinase (326 aa)
       
      0.982
DPS1
Dihydrodipicolinate synthase (345 aa)
   
 
  0.980
THS1
Threonine synthase (498 aa)
   
 
  0.904
CYCD1
D-type cyclin (421 aa)
       
      0.862
HSK1
Homoserine kinase (358 aa)
 
   
  0.825
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.753
DPD1
Diaminopimelate decarboxylase (473 aa)
   
 
  0.745
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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