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CYCC1 CYCC1 CYCM1 CYCM1 CYCB1 CYCB1 EDP07947 EDP07947 EDO98856 EDO98856 RPB1 RPB1 EDP04821 EDP04821 CDKD1 CDKD1 EDO95757 EDO95757 EDP01939 EDP01939 EDP03772 EDP03772
"CDKD1" - CDK activating kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDKD1CDK activating kinase (353 aa)    
Predicted Functional Partners:
CYCC1
C-type cyclin (216 aa)
     
  0.991
EDO98856
Predicted protein (179 aa)
     
  0.983
EDP04821
Predicted protein (341 aa)
     
  0.980
EDP03772
Predicted protein (144 aa)
     
  0.980
EDP07947
Predicted protein (356 aa)
     
  0.975
EDP01939
Predicted protein (435 aa)
     
  0.975
CYCM1
Cyclin (473 aa)
     
  0.970
EDO95757
Predicted protein (142 aa)
     
  0.955
CYCB1
B type cyclin (424 aa)
 
   
  0.955
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
       
  0.953
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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