Full Link:
STRINGSTRING
EDP03315 EDP03315 EDO98741 EDO98741 EDP09659 EDP09659 EDP04357 EDP04357 PRP38 PRP38 EDP09315 EDP09315 EDP00621 EDP00621 EDP02936 EDP02936 EDO96685 EDO96685 OGT1 OGT1 TOP2 TOP2
"EDP02936" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP02936Predicted protein (365 aa)    
Predicted Functional Partners:
EDP09659
Casein kinase 2 beta chain, CK2B; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (204 aa)
     
  0.983
EDP09315
High mobility group protein (552 aa)
     
  0.981
EDO96685
Global transcription factor (1054 aa)
     
  0.933
OGT1
O-linked N-acetylglucosamine transferase (837 aa)
     
      0.919
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
 
  0.857
EDO98741
Paf1 complex component (106 aa)
     
      0.848
EDP04357
Paf1 complex component (973 aa)
       
      0.848
EDP03315
Paf1 complex component (656 aa)
       
      0.848
EDP00621
Paf1 complex component (502 aa)
       
      0.848
PRP38
pre-mRNA splicing factor (284 aa)
     
      0.843
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (2%)