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PGM2 PGM2 PGD1 PGD1 PGM1a PGM1a RBCS1 RBCS1 PGM5 PGM5 GLYK GLYK EDO96901 EDO96901 EDP04023 EDP04023 rbcL rbcL PGM4 PGM4 EDP03907 EDP03907
"GLYK" - Glycerate kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYKGlycerate kinase (351 aa)    
Predicted Functional Partners:
RBCS1
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1, chloroplast precursor; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (185 aa)
         
    0.932
EDO96901
Predicted protein; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (139 aa)
         
    0.932
rbcL
Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (475 aa)
         
    0.932
PGM2
Phosphoglycerate mutase (247 aa)
     
 
    0.931
PGM4
Phosphoglycerate mutase (467 aa)
     
 
    0.931
PGM5
Phosphoglycerate mutase (228 aa)
         
    0.931
PGM1a
Phosphoglycerate mutase (626 aa)
         
    0.930
EDP04023
Predicted protein (383 aa)
         
    0.923
PGD1
D-3-phosphoglycerate dehydrogenase (587 aa)
         
    0.923
EDP03907
Predicted protein (391 aa)
         
    0.923
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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